All Versions
48
Latest Version
Avg Release Cycle
54 days
Latest Release
995 days ago

Changelog History
Page 4

  • v0.20.0 Changes

    June 01, 2018
    • 🔨 Refactored RankSelect API to consistently use u64.
    • 👉 Use bv crate in suffix array implementation.

  • v0.19.0 Changes

    May 25, 2018
    • rank-0 and select-0 in RankSelect.
    • 👉 use bv crate for RankSelect.

  • v0.18.0 Changes

    May 04, 2018
    • More flexible FASTA API.
    • 🛠 Fixed bug in KMP.

  • v0.17.0 Changes

    February 22, 2018
    • 🐛 Bug fix in Ukkonen algorithm
    • Convenience improvements to API

  • v0.16.0 Changes

    January 05, 2018
    • 👍 Pairwise alignment has been rewritten to support banded alignment and clips.
    • Various minor API additions and improvements.
    • 🛠 Several small bug fixes.

  • v0.15.0 Changes

    November 20, 2017
    • ➕ Add pair hidden markov model implementation to calculate the probability of two sequences being related.
    • 🛠 Various minor bug fixes and usability improvements.

  • v0.14.2 Changes

    August 30, 2017
    • 👌 Improved numerical stability of CDF construction.
    • Speed improvements to occurrence array lookups in FM-index.
    • 👌 Improved GFF/GTF variant format handling.
    • 👌 Improved robustness of credible interval calculating in CDF.
    • 🐛 Bug fixes for log probability implementation.

  • v0.14.1 Changes

    June 23, 2017

    🔄 Changed

    • Replace nalgebra dependency with ndarray crate.

  • v0.14.0 Changes

    June 15, 2017

    🔄 Changed

    • GTF/GFF reader can now handle duplicate keys.
    • ⚡️ Updated dependencies.
    • RNA alphabet.
    • 👌 Improved FASTQ reader.
    • 🛠 Fixes in alignment algorithm.

  • v0.13.0 Changes

    May 09, 2017

    🔄 Changed

    • fasta::IndexedReader now also provides an iterator.
    • IntervalTree provides a mutable iterator.
    • 🛠 Various fixes to Fasta IO.
    • 🛠 Fixed calculation of expected FDR.