All Versions
44
Latest Version
Avg Release Cycle
52 days
Latest Release
102 days ago

Changelog History
Page 1

  • v0.39.2

    February 09, 2022
  • v0.39.1

    January 12, 2022
  • v0.39.0 Changes

    October 20, 2021

    ๐Ÿ”‹ Features

  • v0.38.0 Changes

    October 04, 2021

    ๐Ÿ”‹ Features

    • โž• adds iupac amino acid alpha (#444) (f4b7a7c)
    • ๐Ÿ‘ Allow to compute bayesian model via the exploration of the marginal distribution. (#453) (d09033c)

    ๐Ÿ› Bug Fixes

    • backward search yielding potentially incorrect positions on FM-Index (#454) (#455) (3489e6a)
  • v0.37.1

    August 23, 2021
  • v0.37.0 Changes

    July 09, 2021

    ๐Ÿ”‹ Features

    • โž• add method to retrieve all event posteriors from Bayesian model. (e5feda8)
  • v0.36.0 Changes

    July 06, 2021

    ๐Ÿ”‹ Features

    • Baum-Welch algorithm for Discrete HMM (#432) (eb8b8cb)
  • v0.35.0 Changes

    July 05, 2021
    • ๐Ÿ‘Œ Improved buffer control in Fasta and Fastq API (@natir).
    • ๐Ÿ›  Fixed an indexing bug in ArrayBackedIntervalTree (@wabain).
    • ๐Ÿ›  Fixed a corner case where the FASTX parser could have looped infinitely (@morsecodist).
    • ๐Ÿ›  Fixed compiler warnings (@fxwiegand).
    • ๐Ÿ‘Œ Improved documentation for FASTA index (@mbhall88).
  • v0.34.0 Changes

    May 04, 2021
    • Bayesian model framework now relies on Hash instead of Ord for accessing events (@johanneskoester).
    • โž• Added wavelet matrix datastructure (@Identi, @tedil).
  • v0.33.0 Changes

    March 09, 2021
    • ๐Ÿ›  Fixed a floating point error in gcn_content (@tedil).
    • ๐Ÿ‘Œ Improved error messages in io module (@fxwiegand).
    • ๐Ÿ‘ Better memory usage of HomopolypairHMM (@tedil).
    • ๐Ÿ‘Œ Improved documentation (@TianShi2001, @m0ssc0de, @dcroote).
    • ๐Ÿ‘Œ Support for reading compact BED files (@manzt).
    • API improvements for Alphabet and GFF reader (@tshauck).
    • Switched to thiserror for error handling (@delehef).
    • โœ‚ Removed unsafe code (@huonw).
    • ๐Ÿ›  Fixed overflow in ShiftAnd algorithm (@dcroote).
    • โœ… Various additional test cases (@dcroote).
    • Extended API for SMEM computation on FMDIndex (@Identi).
    • โž• Added a parser for Newick phylogenetic trees (@delehef).